Databases available for BLAST search


Peptide Sequence Databases


none

Nucleotide Sequence Databases


cichlid_est_db
All cichlidae sequences submitted in GenBank dbEST - Updated July 21, 2009.

tilapia_assembled_ests
56,218 sequence clusters from the Tilapia EST project.

cofactor_testis_rna_v1
101,684 sequence clusters from the Cofactor testis transcriptome.

tilapia_bac_end_db
221,248 Tilapia Bac-end sequences from the Broad and Genoscope.

jgi_traces_db
Metriaclima, Labeotropheus, Melanochromis, Copadichromis, and Rhamphochromis sequences from JGI submitted to the trace archive at Genbank.

jgi_scaffolds_db
Scaffolds produced from aligning the above JGI reads.

all_available_cichlid_seqs
All of the above databases combined.