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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Malawi cichlids-Metriaclima x Labeotropheus
Tilapia-Tilapia radiation hybrid map
(Reference Set)
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Maps LG22 LG16-21_LOD5.2-RH10
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Bes_With_Gene
Contig
Est
GENE
microsatellite_marker
SNP
Other
 
Show Labels: None Landmarks All
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG16-21_LOD5.2-RH10
Map Start: 0.00 cM
Map Stop: 48.50 cM
Features by Type:
2 Bes_With_Gene
1 Contig
2 Est
1 GENE
2 microsatellite_marker
6 SNP
14 Total

Map Features

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Items 1 to 14 of 14.
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG16-21_LOD5.2-RH10
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
WG0AAA20YD23RM1_LIM1 Bes_With_Gene 0.00 No other positions
SNP_244316515 SNP 2.90 No other positions
SNP_244316715 SNP 9.40 No other positions
GM255 microsatellite_marker 24.80 Tilapia - Tilapia map - LG16 GM255 microsatellite_marker 75.00 (cM) Automated name-based View Maps
GM250 microsatellite_marker 27.40 Tilapia - Tilapia map - LG16 GM250 microsatellite_marker 75.00 (cM) Automated name-based View Maps
Malawi cichlids - Metriaclima x Labeotropheus - LG22 GM250 microsatellite_marker 16.81 (cM) Automated name-based View Maps
C990 Contig 28.30 No other positions
SNP_244316471 SNP 30.00 No other positions
SNP_244316627 SNP 31.90 No other positions
SNP_244316451 SNP 32.80 No other positions
SNP_244316587 SNP 33.40 No other positions
EST_75611738 Est 37.40 No other positions
WG0AAA34YL09HM1_GDF6 Bes_With_Gene 41.20 No other positions
RBEST_ONI03EB.39_C10_06 Est 43.80 No other positions
AF197193_MSTN GENE 48.50 No other positions