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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Tilapia-Tilapia map
Tilapia-Tilapia radiation hybrid map
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps LG7 LG6_LOD6.2-RH7
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Bes_With_Gene
Contig
Est
GENE
microsatellite_marker
Read
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG6_LOD6.2-RH7
Map Start: 0.00 cM
Map Stop: 112.70 cM
Features by Type:
2 Bes_With_Gene
9 Contig
21 Est
1 GENE
6 microsatellite_marker
1 Read
4 SNP
44 Total

Map Features

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Items 1 to 25 of 44.       of 2 | Next
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG6_LOD6.2-RH7
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM539 microsatellite_marker 0.00 Tilapia - Tilapia map - LG6 GM539 microsatellite_marker 19.00 (cM) Automated name-based View Maps
UNH231 microsatellite_marker 3.10 Tilapia - Tilapia map - LG6 UNH231 microsatellite_marker 6.00 (cM) Automated name-based View Maps
EST_75611628 Est 5.10 No other positions
EST_75611757 Est 5.80 No other positions
C608 Contig 7.20 No other positions
EST_75611719 Est 9.80 No other positions
GM189_LG7 microsatellite_marker 12.50 Tilapia - Tilapia map - LG7 GM189 microsatellite_marker 56.00 (cM) Automated name-based View Maps
EST_75611622 Est 13.10 No other positions
EST_75611561 Est 14.60 No other positions
RBEST_C269 Est 17.60 No other positions
SNP_244316460 SNP 19.10 No other positions
SNP_244316559 SNP 22.50 No other positions
EST_75611691 Est 26.90 No other positions
C1133 Contig 29.00 No other positions
C407 Contig 31.10 No other positions
WG0AAA31YE16HM1_ALDOA Bes_With_Gene 33.80 No other positions
EST_75611621 Est 38.30 No other positions
GM514 microsatellite_marker 41.40 Tilapia - Tilapia map - LG6 GM514 microsatellite_marker 23.00 (cM) Automated name-based View Maps
EST_75611616 Est 45.30 No other positions
EST_75611520 Est 50.10 No other positions
GM321 microsatellite_marker 55.00 Tilapia - Tilapia map - LG6 GM321 microsatellite_marker 38.00 (cM) Automated name-based View Maps
C336 Contig 57.30 No other positions
EST_75611625 Est 57.60 No other positions
RBEST_C408 Est 64.60 No other positions
C1459 Contig 68.80 No other positions