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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Tilapia-Tilapia radiation hybrid map
(Reference Set)
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Correspondences
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Maps LG12_LOD5.8-RH3
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Bes
Bes_With_Gene
Contig
Est
GENE
microsatellite_marker
Read
SNP
Other
 
Show Labels: None Landmarks All
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG12_LOD5.8-RH3
Map Start: 0.00 cM
Map Stop: 190.60 cM
Features by Type:
1 Bes
1 Bes_With_Gene
16 Contig
25 Est
6 GENE
12 microsatellite_marker
3 Read
16 SNP
80 Total

Map Features

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Items 1 to 25 of 80.       of 4 | Next
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG12_LOD5.8-RH3
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM629 microsatellite_marker 0.00 Tilapia - Tilapia map - LG12 GM629 microsatellite_marker 5.00 (cM) Automated name-based View Maps
EST_75641181 Est 10.70 No other positions
SNP_244316575 SNP 13.00 No other positions
EE723961 Est 14.60 No other positions
RBEST_C702 Est 18.40 No other positions
SNP_244316567 SNP 22.00 No other positions
AB060814 GENE 23.30 No other positions
GM404 microsatellite_marker 25.60 Tilapia - Tilapia map - LG12 GM404 microsatellite_marker 5.00 (cM) Automated name-based View Maps
C87 Contig 31.20 No other positions
RBEST_C724 Est 36.60 No other positions
RBEST_ONI02GC.39_G02_14 Est 38.80 No other positions
SNP_244316534 SNP 40.90 No other positions
SNP_244316544 SNP 43.10 No other positions
SNP_244316721 SNP 50.60 No other positions
SNP_244316670 SNP 63.00 No other positions
C1429 Contig 65.30 No other positions
AY997243_DOCK5 GENE 66.90 No other positions
EE723810_ALDOC Est 67.70 No other positions
GM284 microsatellite_marker 67.90 Malawi cichlids - Metriaclima x Labeotropheus - LG3 GM284 microsatellite_marker 7.22 (cM) Automated name-based View Maps
Tilapia - Tilapia map - LG12 GM284 microsatellite_marker 0.00 (cM) Automated name-based View Maps
RBEST_ONI04BD.39_E06_10 Est 70.10 No other positions
SNP_244316668 SNP 73.10 No other positions
EST_75611775 Est 79.40 No other positions
RBEST_C556 Est 80.50 No other positions
C1125 Contig 80.70 No other positions
G12381_UNH230 microsatellite_marker 81.00 No other positions