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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Tilapia-Tilapia radiation hybrid map
(Reference Set)
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Maps LG15_LOD5.9-RH16
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bes
Contig
Est
GENE
microsatellite_marker
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG15_LOD5.9-RH16
Map Start: 0.00 cM
Map Stop: 64.00 cM
Features by Type:
1 Bes
5 Contig
6 Est
4 GENE
3 microsatellite_marker
5 SNP
24 Total

Map Features

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Items 1 to 24 of 24.
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG15_LOD5.9-RH16
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
EST_75611629 Est 0.00 No other positions
RBEST_C460 Est 2.60 No other positions
EF032941_RYR3 GENE 4.10 No other positions
C557 Contig 5.20 No other positions
EE723885_PCMT1 GENE 7.80 No other positions
SNP_244316595 SNP 13.70 No other positions
C1179 Contig 14.40 No other positions
GM419 microsatellite_marker 16.90 Tilapia - Tilapia map - LG15 GM419 microsatellite_marker 8.00 (cM) Automated name-based View Maps
GM011 microsatellite_marker 18.50 Tilapia - Tilapia map - LG15 GM011 microsatellite_marker 7.00 (cM) Automated name-based View Maps
SNP_244316585 SNP 20.00 No other positions
SNP_244316698 SNP 21.60 No other positions
SNP_244316706 SNP 26.20 No other positions
SNP_244316727 SNP 37.90 No other positions
C1063 Contig 47.40 No other positions
C1193 Contig 47.50 No other positions
EE724059_GOPC Est 48.40 No other positions
EE723928_MDN1 Est 50.10 No other positions
AB182647_RAD51 GENE 50.60 No other positions
WG0AAA47YB05 Bes 51.60 No other positions
GM210 microsatellite_marker 52.30 Malawi cichlids - Metriaclima x Labeotropheus - LG16 GM210 microsatellite_marker 0.00 (cM) Automated name-based View Maps
Tilapia - Tilapia map - LG15 GM210 microsatellite_marker 22.00 (cM) Automated name-based View Maps
C988 Contig 54.70 No other positions
EST_75611539 Est 58.40 No other positions
DQ465390_MAP3K7IP2 GENE 60.10 No other positions
EST_75611613 Est 64.00 No other positions