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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Tilapia-Tilapia radiation hybrid map
(Reference Set)
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Correspondences
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Maps LG17.rev_LOD5.4-RH14
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bes
Contig
Est
GENE
microsatellite_marker
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG17.rev_LOD5.4-RH14
Map Start: 0.00 cM
Map Stop: 38.90 cM
Features by Type:
1 Bes
3 Contig
5 Est
2 GENE
2 microsatellite_marker
1 SNP
14 Total

Map Features

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Items 1 to 14 of 14.
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG17.rev_LOD5.4-RH14
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
C461 Contig 0.00 No other positions
DQ066879_PGM1 GENE 8.30 No other positions
RBEST_C930 Est 10.90 No other positions
C392 Contig 14.60 No other positions
C1101 Contig 16.70 No other positions
GM111 microsatellite_marker 17.60 Tilapia - Tilapia map - LG17 GM111 microsatellite_marker 69.00 (cM) Automated name-based View Maps
EST_75611677 Est 19.40 No other positions
EST_75611465 Est 20.40 No other positions
AB290826_kir7.2 GENE 21.20 No other positions
EST_75641634 Est 23.80 No other positions
GM317 microsatellite_marker 25.80 Tilapia - Tilapia map - LG17 GM317 microsatellite_marker 68.00 (cM) Automated name-based View Maps
WG0AAA42YG04 Bes 28.50 No other positions
EST_75641153 Est 31.30 No other positions
SNP_244316740 SNP 38.90 No other positions