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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Tilapia-Tilapia radiation hybrid map
(Reference Set)
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Maps LG1_LOD6.4-RH8
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Bes
Contig
Est
GENE
microsatellite_marker
SNP
Other
 
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
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Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG1_LOD6.4-RH8
Map Start: 0.00 cM
Map Stop: 107.30 cM
Features by Type:
3 Bes
8 Contig
17 Est
4 GENE
3 microsatellite_marker
6 SNP
41 Total

Map Features

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Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG1_LOD6.4-RH8
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
EST_75611554 Est 0.00 No other positions
SNP_244316490 SNP 3.10 No other positions
SNP_244316703 SNP 6.50 No other positions
AY737050_THAP1 GENE 8.60 No other positions
AY513739_NKCC2 GENE 14.30 No other positions
GM314 microsatellite_marker 16.60 Tilapia - Tilapia map - LG1 GM314 microsatellite_marker 4.00 (cM) Automated name-based View Maps
EE723828 Est 17.20 No other positions
EE723904_MYEF2 Est 18.30 No other positions
DQ465380_RNF128 GENE 19.30 No other positions
WG0AAA13YF01HM1 Bes 21.70 No other positions
RBEST_C932 Est 23.40 No other positions
WG0AAA10YC11RM1 Bes 28.40 No other positions
EST_75611511 Est 29.10 No other positions
RBEST_C851 Est 35.20 No other positions
EE724067 Est 36.90 No other positions
RBEST_ONI01DB.39_E11_09 Est 38.10 No other positions
UNH213 microsatellite_marker 40.40 Tilapia - Tilapia map - LG1 UNH213 microsatellite_marker 18.00 (cM) Automated name-based View Maps
C947 Contig 42.70 No other positions
EST_75611538 Est 44.90 No other positions
EE723869_KARS Est 46.90 No other positions
SNP_244316459 SNP 47.70 No other positions
SNP_244316565 SNP 52.90 No other positions
RBEST_ONI02CB.39_F06_12 Est 55.10 No other positions
C1259 Contig 58.40 No other positions
C955 Contig 60.50 No other positions