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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Tilapia-Tilapia radiation hybrid map
(Reference Set)
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Correspondences
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Maps LG22_LOD5.3-RH11
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Bes_With_Gene
Contig
Est
GENE
microsatellite_marker
SNP
Other
 
Show Labels: None Landmarks All
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG22_LOD5.3-RH11
Map Start: 0.00 cM
Map Stop: 43.30 cM
Features by Type:
1 Bes_With_Gene
2 Contig
3 Est
3 GENE
1 microsatellite_marker
5 SNP
15 Total

Map Features

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Items 1 to 15 of 15.
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG22_LOD5.3-RH11
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AY663855_HSD17B8 GENE 0.00 No other positions
AJ577836_MHCI GENE 6.00 Tilapia - Tilapia map - LG22 mhc1 GENE 11.00 (cM) Automated name-based View Maps
SNP_244316482 SNP 9.50 No other positions
SNP_244316702 SNP 12.80 No other positions
GM531 microsatellite_marker 19.00 Tilapia - Tilapia map - LG22 GM531 microsatellite_marker 13.00 (cM) Automated name-based View Maps
WG0AAA30YF08HM1_TGIF2LX Bes_With_Gene 26.30 No other positions
RBEST_ONI03BC.39_G02_14 Est 26.60 No other positions
SNP_244316594 SNP 27.00 No other positions
SNP_244316635 SNP 29.10 No other positions
EST_75611801 Est 33.10 No other positions
AB075952_EF-1a GENE 38.20 No other positions
C329 Contig 38.50 No other positions
C388 Contig 40.00 No other positions
SNP_244316645 SNP 41.10 No other positions
EST_75611490 Est 43.30 No other positions