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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Tilapia-Tilapia radiation hybrid map
(Reference Set)
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Maps LG2_LOD5.6-RH5
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
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Bes_With_Gene
Contig
Est
GENE
microsatellite_marker
Read
SNP
Other
 
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
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Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG2_LOD5.6-RH5
Map Start: 0.00 cM
Map Stop: 103.80 cM
Features by Type:
3 Bes_With_Gene
11 Contig
19 Est
3 GENE
2 microsatellite_marker
1 Read
5 SNP
44 Total

Map Features

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Items 1 to 25 of 44.       of 2 | Next
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG2_LOD5.6-RH5
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
C136 Contig 0.00 No other positions
SNP_244316542 SNP 1.40 No other positions
EE724126_TMED9 Est 6.20 No other positions
EST_75611782 Est 6.90 No other positions
EST_75640846 Est 12.90 No other positions
RBEST_ONI03AA.39_A03_01 Est 17.50 No other positions
RBEST_ONI02DC.39_C01_05 Est 17.90 No other positions
EST_75641174 Est 18.60 No other positions
WG0AAA2YH18HM1_FGF24 Bes_With_Gene 19.20 No other positions
WG0AAA33YA15HM1_TEX14 Bes_With_Gene 22.00 No other positions
SNP_244316562 SNP 25.10 No other positions
RBEST_ONI04JD.39_F12_12 Est 29.50 No other positions
EST_75611607 Est 35.30 No other positions
C1279 Contig 37.40 No other positions
RBEST_C805 Est 39.10 No other positions
EE723892 Est 39.80 No other positions
C146 Contig 45.10 No other positions
RBEST_ONI05BC.39_G12_14 Est 46.50 No other positions
GM223 microsatellite_marker 47.60 Tilapia - Tilapia map - LG2 GM223 microsatellite_marker 20.00 (cM) Automated name-based View Maps
EST_75611654 Est 48.70 No other positions
C1028 Contig 51.60 No other positions
EST_75611734 Est 52.00 No other positions
AY522594_PCDHAC2 GENE 53.40 No other positions
SNP_244316497 SNP 57.00 No other positions
C344 Contig 59.40 No other positions