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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Tilapia-Tilapia radiation hybrid map
(Reference Set)
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Correspondences
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Maps LG4_LOD5.6-RH6
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Bes
Contig
Est
GENE
microsatellite_marker
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG4_LOD5.6-RH6
Map Start: 0.00 cM
Map Stop: 66.30 cM
Features by Type:
1 Bes
9 Contig
9 Est
2 GENE
2 microsatellite_marker
6 SNP
29 Total

Map Features

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Items 1 to 25 of 29.       of 2 | Next
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG4_LOD5.6-RH6
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
RBEST_C894 Est 0.00 No other positions
WG0AAA11YA12 Bes 5.30 No other positions
C1419 Contig 5.70 No other positions
C1397 Contig 7.00 No other positions
EE723801 Est 7.40 No other positions
AY663853_HSD17BP1 GENE 11.00 No other positions
RBEST_C786 Est 12.30 No other positions
RBEST_C776 Est 12.70 No other positions
GM553 microsatellite_marker 13.10 Tilapia - Tilapia map - LG4 GM553 microsatellite_marker 65.00 (cM) Automated name-based View Maps
C1355 Contig 14.20 No other positions
C1244 Contig 15.00 No other positions
EST_75641788 Est 17.70 No other positions
C429 Contig 18.40 No other positions
DQ001950_GFAP GENE 18.80 No other positions
C913 Contig 20.00 No other positions
RBEST_ONI01AD.39_E01_09 Est 23.60 No other positions
C14 Contig 24.80 No other positions
SNP_244316505 SNP 26.10 No other positions
SNP_244316448 SNP 28.10 No other positions
SNP_244316467 SNP 29.90 No other positions
SNP_244316674 SNP 36.00 No other positions
GM509 microsatellite_marker 44.00 Tilapia - Tilapia map - LG4 GM509 microsatellite_marker 77.00 (cM) Automated name-based View Maps
EE723922_ARL6IP1 Est 47.70 No other positions
C287 Contig 49.40 No other positions
SNP_244316496 SNP 53.00 No other positions