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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Tilapia-Tilapia radiation hybrid map
(Reference Set)
Min.
Correspondences
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Maps LG5.rev_LOD6.9-RH6
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Bes
Bes_With_Gene
Contig
Est
GENE
microsatellite_marker
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG5.rev_LOD6.9-RH6
Map Start: 0.00 cM
Map Stop: 104.60 cM
Features by Type:
1 Bes
2 Bes_With_Gene
5 Contig
13 Est
6 GENE
4 microsatellite_marker
6 SNP
37 Total

Map Features

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Items 1 to 25 of 37.       of 2 | Next
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG5.rev_LOD6.9-RH6
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
C148 Contig 0.00 No other positions
SNP_244316468 SNP 3.10 No other positions
WG0AAA4YI10 Bes 11.70 No other positions
EST_75611817 Est 24.00 No other positions
EST_75611702 Est 30.20 No other positions
EST_75611537 Est 34.90 No other positions
GM006 microsatellite_marker 39.60 Tilapia - Tilapia map - LG5 GM006 microsatellite_marker 53.00 (cM) Automated name-based View Maps
BLUOPS GENE 48.60 Tilapia - Tilapia map - LG5 bluops GENE 48.00 (cM) Automated name-based View Maps
EE724050_UQCRC1 Est 52.20 No other positions
C815 Contig 55.50 No other positions
AF247128_LWS GENE 56.40 Burtoni - Burtoni Map - LG3 Lws GENE 0.00 (cM) Automated name-based View Maps
AF247116_SWS-2A GENE 57.10 No other positions
EE724154_LRIG1 Est 59.00 No other positions
SNP_244316724 SNP 64.10 No other positions
WG0AAA44YK23HM1_BAP Bes_With_Gene 67.20 No other positions
C873 Contig 68.20 No other positions
AB101666_GNRH2 GENE 69.50 No other positions
RBEST_C909 Est 69.80 No other positions
UNH169 microsatellite_marker 73.40 Tilapia - Tilapia map - LG5 UNH169 microsatellite_marker 38.00 (cM) Automated name-based View Maps
Malawi cichlids - Metriaclima x Labeotropheus - LG12 UNH169 microsatellite_marker 15.60 (cM) Automated name-based View Maps
RBEST_C673 Est 74.60 No other positions
UNH309 microsatellite_marker 75.70 Tilapia - Tilapia map - LG5 UNH309 microsatellite_marker 30.00 (cM) Automated name-based View Maps
SNP_244316535 SNP 78.90 No other positions
SNP_244316660 SNP 79.50 No other positions
SNP_244316529 SNP 80.00 No other positions
SNP_244316457 SNP 81.10 No other positions