CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Tilapia-Tilapia radiation hybrid map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG8-24_LOD5.4-RH3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Bes
Bes_With_Gene
Contig
Est
GENE
microsatellite_marker
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: LG8-24_LOD5.4-RH3
Map Start: 0.00 cM
Map Stop: 167.70 cM
Features by Type:
1 Bes
1 Bes_With_Gene
9 Contig
31 Est
5 GENE
5 microsatellite_marker
9 SNP
61 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 61.       of 3 | Next
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - LG8-24_LOD5.4-RH3
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
RBEST_C427 Est 0.00 No other positions
EST_75611529 Est 1.10 No other positions
EST_75611646 Est 2.60 No other positions
EE723871 Est 6.10 No other positions
GM027 microsatellite_marker 6.90 Tilapia - Tilapia map - LG8 GM027 microsatellite_marker 10.00 (cM) Automated name-based View Maps
C374 Contig 7.30 No other positions
EE723844 Est 9.20 No other positions
C1400 Contig 19.80 No other positions
EST_75611630 Est 21.80 No other positions
EST_75611838 Est 24.10 No other positions
ONG_S25_E04_SOX9A Est 25.10 No other positions
EST_75611753 Est 27.00 No other positions
EST_75611800 Est 32.40 No other positions
G12282_UNH129 microsatellite_marker 33.90 Tilapia - Tilapia map - LG8 UNH129 microsatellite_marker 0.00 (cM) Automated name-based View Maps
RBEST_C310 Est 34.20 No other positions
WG0AAA26YL09 Bes 38.00 No other positions
AB182646_DMC1 GENE 40.90 No other positions
EST_75611774 Est 42.70 No other positions
EE723846_FAM20C Est 45.40 No other positions
C1173 Contig 52.00 No other positions
SNP_244316517 SNP 53.10 No other positions
G12297_UNH145 microsatellite_marker 53.80 No other positions
EE723998_ACE Est 55.60 No other positions
EST_75611470 Est 59.40 No other positions
EST_75641781 Est 59.70 No other positions