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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Tilapia-Tilapia radiation hybrid map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps ORPH_LOD5.4-RH39
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Contig
microsatellite_marker
Read
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Tilapia - A high-resolution map of the tilapia genome: a resource for stud [ View Map Set Info ]
Map Name: ORPH_LOD5.4-RH39
Map Start: 0.00 cM
Map Stop: 1.80 cM
Features by Type:
1 Contig
1 microsatellite_marker
1 Read
3 Total

Map Features

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Items 1 to 3 of 3.
Tilapia - A high-resolution map of the tilapia genome: a resource for stud - ORPH_LOD5.4-RH39
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AY522592 Read 0.00 No other positions
C651 Contig 1.20 No other positions
GM031 microsatellite_marker 1.80 Tilapia - Tilapia map - LG7 GM031 microsatellite_marker 18.00 (cM) Automated name-based View Maps