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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Malawi cichlids-Metriaclima x Labeotropheus
(Reference Set)
Tilapia-Tilapia map
Min.
Correspondences
Align Vertically
Stack
Maps LG22 LG16
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
GENE
microsatellite_marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Malawi cichlids - Directional selection has shaped the oral jaws of Lake Malawi ci [ View Map Set Info ]
Map Name: LG22
Map Start: 0.00 cM
Map Stop: 19.39 cM
Features by Type:
4 microsatellite_marker
4 Total

Map Features

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Items 1 to 4 of 4.
Malawi cichlids - Directional selection has shaped the oral jaws of Lake Malawi ci - LG22
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM250 microsatellite_marker 16.81 Tilapia - Tilapia map - LG16 GM250 microsatellite_marker 75.00 (cM) Automated name-based View Maps
Tilapia - Tilapia radiation hybrid map - LG16-21_LOD5.2-RH10 GM250 microsatellite_marker 27.40 (cM) Automated name-based View Maps
UNH2185 microsatellite_marker 19.39 No other positions
UNH138 microsatellite_marker 15.79 Tilapia - Tilapia map - LG16 UNH138 microsatellite_marker 100.00 (cM) Automated name-based View Maps
GM137a microsatellite_marker 0.00 Tilapia - Tilapia radiation hybrid map - LG16-21_LOD5.4-RH5 GM137 microsatellite_marker 80.90 (cM) Automated name-based View Maps