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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Malawi cichlids-Metriaclima x Labeotropheus
(Reference Set)
Tilapia-Tilapia radiation hybrid map
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Correspondences
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Maps LG3 LG12_LOD5.8-RH3
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Bes
Bes_With_Gene
Contig
Est
GENE
microsatellite_marker
Read
SNP
Other
 
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Malawi cichlids - Directional selection has shaped the oral jaws of Lake Malawi ci [ View Map Set Info ]
Map Name: LG3
Map Start: 0.00 cM
Map Stop: 49.68 cM
Features by Type:
9 microsatellite_marker
9 Total

Map Features

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Items 1 to 9 of 9.
Malawi cichlids - Directional selection has shaped the oral jaws of Lake Malawi ci - LG3
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
UNH2104 microsatellite_marker 0.00 Burtoni - Burtoni Map - LG12 UNH2104 microsatellite_marker 60.30 (cM) Automated name-based View Maps
UNH2162 microsatellite_marker 2.26 No other positions
GM284 microsatellite_marker 7.22 Tilapia - Tilapia map - LG12 GM284 microsatellite_marker 0.00 (cM) Automated name-based View Maps
Tilapia - Tilapia radiation hybrid map - LG12_LOD5.8-RH3 GM284 microsatellite_marker 67.90 (cM) Automated name-based View Maps
UNH2012 microsatellite_marker 10.16 No other positions
UNH874 microsatellite_marker 14.69 Tilapia - Tilapia map - LG12 UNH874 microsatellite_marker 23.00 (cM) Automated name-based View Maps
UNH2133 microsatellite_marker 23.20 No other positions
UNH2141 microsatellite_marker 26.41 Burtoni - Burtoni Map - LG12 UNH2141 microsatellite_marker 22.20 (cM) Automated name-based View Maps
UNH2084 microsatellite_marker 34.61 Burtoni - Burtoni Map - LG5 UNH2084 microsatellite_marker 0.00 (cM) Automated name-based View Maps
UNH1009 microsatellite_marker 49.68 Tilapia - Tilapia map - LG12 UNH1009 microsatellite_marker 43.00 (cM) Automated name-based View Maps