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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Malawi cichlids-Cynotilapia x Pseudotropheus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG20
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Malawi cichlids - Genetic interactions controlling sex and color establish the pot [ View Map Set Info ]
Map Name: LG20
Map Start: 0.00 cM
Map Stop: 54.18 cM
Features by Type:
19 SNP
19 Total

Map Features

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Items 1 to 19 of 19.
Malawi cichlids - Genetic interactions controlling sex and color establish the pot - LG20
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
4026 SNP 0.00 No other positions
43000 SNP 7.38 No other positions
38612 SNP 7.89 No other positions
49193 SNP 18.25 No other positions
11448 SNP 28.10 No other positions
27610 SNP 29.58 No other positions
19111 SNP 35.54 No other positions
53793 SNP 36.01 No other positions
44246 SNP 36.20 No other positions
2991 SNP 38.13 No other positions
18479 SNP 41.05 No other positions
48379 SNP 48.66 No other positions
29684 SNP 48.66 No other positions
24836 SNP 49.42 No other positions
20274 SNP 49.44 No other positions
9990 SNP 50.57 No other positions
26522 SNP 53.89 No other positions
29603 SNP 54.08 No other positions
15153 SNP 54.18 No other positions