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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Malawi cichlids-Cynotilapia x Pseudotropheus
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps LG21
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Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Malawi cichlids - Genetic interactions controlling sex and color establish the pot [ View Map Set Info ]
Map Name: LG21
Map Start: 0.00 cM
Map Stop: 40.72 cM
Features by Type:
16 SNP
16 Total

Map Features

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Items 1 to 16 of 16.
Malawi cichlids - Genetic interactions controlling sex and color establish the pot - LG21
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
30788 SNP 0.00 No other positions
4511 SNP 0.19 No other positions
39824 SNP 1.16 No other positions
2754 SNP 1.43 No other positions
44552 SNP 4.21 No other positions
29162 SNP 11.41 No other positions
4624 SNP 11.48 No other positions
17738 SNP 13.06 No other positions
13208 SNP 17.66 No other positions
7114 SNP 18.28 No other positions
41064 SNP 19.05 No other positions
49515 SNP 22.18 No other positions
299 SNP 26.55 No other positions
164 SNP 37.84 No other positions
45322 SNP 40.59 No other positions
19146 SNP 40.72 No other positions