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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Malawi cichlids-Cynotilapia x Pseudotropheus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Malawi cichlids - Genetic interactions controlling sex and color establish the pot [ View Map Set Info ]
Map Name: LG4
Map Start: 0.00 cM
Map Stop: 56.73 cM
Features by Type:
18 SNP
18 Total

Map Features

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Items 1 to 18 of 18.
Malawi cichlids - Genetic interactions controlling sex and color establish the pot - LG4
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
46855 SNP 0.00 No other positions
25625 SNP 0.04 No other positions
43636 SNP 0.61 No other positions
37038 SNP 0.66 No other positions
28037 SNP 0.77 No other positions
3902 SNP 0.92 No other positions
9401 SNP 0.95 No other positions
40219 SNP 3.38 No other positions
6247 SNP 7.01 No other positions
3814 SNP 25.26 No other positions
27051 SNP 25.99 No other positions
34784 SNP 26.96 No other positions
20246 SNP 27.26 No other positions
3120 SNP 32.06 No other positions
17160 SNP 35.15 No other positions
18188 SNP 40.50 No other positions
4649 SNP 50.35 No other positions
10126 SNP 56.73 No other positions