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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Malawi cichlids-Cynotilapia x Pseudotropheus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Malawi cichlids - Genetic interactions controlling sex and color establish the pot [ View Map Set Info ]
Map Name: LG6
Map Start: 0.00 cM
Map Stop: 64.21 cM
Features by Type:
15 SNP
15 Total

Map Features

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Items 1 to 15 of 15.
Malawi cichlids - Genetic interactions controlling sex and color establish the pot - LG6
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
21668 SNP 0.00 No other positions
25128 SNP 14.97 No other positions
30601 SNP 15.52 No other positions
8187 SNP 15.79 No other positions
5361 SNP 15.95 No other positions
12 SNP 20.45 No other positions
30233 SNP 25.84 No other positions
2869 SNP 31.90 No other positions
44468 SNP 34.52 No other positions
28673 SNP 43.80 No other positions
17345 SNP 49.14 No other positions
8536 SNP 57.57 No other positions
45558 SNP 63.07 No other positions
24318 SNP 64.06 No other positions
2506 SNP 64.21 No other positions