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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Malawi cichlids-Cynotilapia x Pseudotropheus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG7
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic Linkage [ View Map Type Info ]
Map Set Name: Malawi cichlids - Genetic interactions controlling sex and color establish the pot [ View Map Set Info ]
Map Name: LG7
Map Start: 0.00 cM
Map Stop: 81.46 cM
Features by Type:
18 SNP
18 Total

Map Features

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Items 1 to 18 of 18.
Malawi cichlids - Genetic interactions controlling sex and color establish the pot - LG7
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
14205 SNP 0.00 No other positions
15683 SNP 2.28 No other positions
41764 SNP 4.99 No other positions
20922 SNP 8.76 No other positions
51792 SNP 19.39 No other positions
51106 SNP 21.84 No other positions
52073 SNP 31.80 No other positions
40685 SNP 35.84 No other positions
11947 SNP 39.81 No other positions
19515 SNP 41.15 No other positions
48755 SNP 43.84 No other positions
41586 SNP 44.17 No other positions
27028 SNP 44.29 No other positions
7990 SNP 58.94 No other positions
19329 SNP 59.19 No other positions
45045 SNP 67.20 No other positions
38120 SNP 80.66 No other positions
39618 SNP 81.46 No other positions